:sequential_nav: next .. _tutorial-basic-vibrational-properties: Vibration modes and phonons =========================== .. sidebar:: **Have you set up the local environment?** If not, :ref:`do that now ` before proceeding. In this set of exercises we will use the method of finite-differences implemented in Siesta to compute force constants in real space. We will explore the cases of a crystal and a molecule. In the former case we will focus on the need of a supercell to represent the real-space force constants, while in the second we will understand how to visualize the vibrational modes. .. note:: Phonon calculations can be very sensitive to numerical artifacts such as those derived from the :ref:`eggbox effect `. Be sure to have the rest of your simulation parameters already converged as best as you can before running the actual force constant matrix calculations. .. toctree:: :maxdepth: 1 Si-bulk/index Benzene/index